Thresholding¶
Methods for defining positive cell populations from continuous expression data.
Overview¶
Spatial transcriptomics data requires robust methods for classifying cells as "positive" or "negative" for markers of interest. SpatialCore provides expression-based classification using metagenes and data-driven thresholds.
Methods¶
| Method | Description |
|---|---|
| Cell Classifier | Expression-based classification using metagenes and GMM/KS thresholds |